A whisper to a scream

Endocasts are the faint whispers of ancient minds. These fossilized phantoms are just about all we have to tell us about the evolutionary history of brains. We are (we are, we are) rather helpless—how can we turn a whisper to a scream?

A human brain (left) and its endocast (center), and a colormap showing distance between endocast and brain (right). Produced using data published by Balzeau and colleagues (2026) and the R package “Morpho” by Stefan Schlager .

Antoine Balzeau and colleagues have recently published an incredible resource for studying brain endocasts, which they aptly call the ‘Rosetta Stone for paleoneurology.’ This is the latest paper from their project PaleoBRAIN, which draws on advanced techniques for studying endocasts and reconstructing the brains of extinct hominins. A few years ago the group published an article led by Nicole Labra asking “What do brain endocasts tell us?”, where they demonstrated the extent to which experts in brain anatomy can nevertheless misidentify actual brain impressions on endocasts. This is a big deal since the identification of brain features, namely sulci separating specific parts of the cortex, is essential for understanding how the human brain has evolved over the past several millions of years. When looking at an endocast, are we really seeing the brain structures that we think we’re seeing?

Balzeau and colleagues make another major contribution to address this problem for paleoneurology. The researchers used advanced MRI brain scanning methods to directly compare the brains and bony endocasts of 75 living humans. They used software that automatically identifies brain sulci from MRI scans and then examined the extent to which each individual’s sulci (left image, above) were expressed on their endocast (center image, above). The study expands greatly on similar work by Jean Dumoncel and colleagues using a slightly different approach. As in the previous research, Balzeau and co found that the endocast can serve as a decent proxy for the underlying brain anatomy, but with some pretty big limitations.

One of the major differences the authors identified between brain and endocast is that whereas brain sulci are often like long valleys (for instance, the long, straight lateral sulcus separating the temporal and frontal/parietal lobes), the corresponding sulci on endocasts are usually much shorter: that is, less of the sulcus makes an impression. Worse, sulci are often broken up into separate segments on the endocast. This is important because if a sulcus isn’t fully preserved we may not know its true course or the spatial relationship between certain brain structures. Plus, if a sulcus is broken up on an endocast, we risk misidentifying the different segments as other, incorrect sulci.

Perhaps the most shocking and sobering observation is that endocasts may bear imprints that are completely unrelated to any actual brain sulci, which they term “MNAS” (marks not associated with sulci). What causes these impish impressions is unclear at this point, but it raises the harrowing possibility that we might identify and interpret fossilized impressions that didn’t actually exist in the brains of ancient animals. Fortunately, Balzeau and team found that MNASes tend to be located closer to the top of an endocast where the brain is not impressing as strongly, whereas true cerebral impressions are strongest in the lower regions of the endocast.

Along these lines, one cool result of the study is that the orbitofrontal sulci, from the part of the brain sitting directly above the eye sockets, were “the most visible impressions” and were observed in all 75 of the endocasts they studied. The orbitofrontal cortex is involved in regulating emotions and impulse control (reviewed in Rudebeck & Rich, 2018), so this part of the brain may have been very important for the evolution of human social behavior. The findings of Balzeau and colleagues suggests we may be able to study this region reliably in the human fossil record. A fossil called MLD 6, for example, is best known for being a beautiful Australopithecus face (well, the right part of it). Yet the fossil is also another overlooked endocast from Makapansgat, South Africa. Specifically, MLD 6 shows pronounced impressions of several of the orbitofrontal sulci, though it is admittedly only well preserved toward the middle.

The partial face and brain endocast of the fossil MLD 6. Views: Front view of the face (top left), face rendered transparent to show the mirror-imaged endocast (top right), right lateral view of the transparent face and endocast (bottom left), and inferior view of the mirror-imaged endocast (bottom right). The “H-shaped” impressions on either side are the medial and lateral orbital sulci connected by the transverse orbital sulcus.

The other major contribution of this paper by Balzeau and colleagues is that all of the data are publicly available (here), meaning that other researchers can validate and expand on this research. This is huge. Historically, most paleoneurologists would have to assess a fossil endocast by consulting an atlas of brain anatomy, which overlooks normal variability. If one were lucky, they could use publications documenting brains of more than one individual, such as the annotated chimpanzee brain images published by Dean Falk and colleagues. The normal variability in both brain morphology and endocranial preservations that Balzeau and co present in this study are great resources on their own. Making all the original data available, though, is a huge step toward putting all paleoneurologists on the same page.

References

Balzeau, A., Bardinet, É., Bardo, A., Bernat, A., Derrey, T., Didier, M., Filippo, A., Hui, J., Kubicka, A. M., Labra, N., Leprince, Y., Mangin, J., Mounier, A., Prima, S., Rivière, D., Santin, M. D., & Giolland, V. (2026). The ‘Rosetta Stone’ of palaeoneurology: A detailed study of the link between the brain and the endocast on 75 volunteers. Journal of Anatomy, joa.70101. https://doi.org/10.1111/joa.70101

Cofran, Z., Hurst, S., Beaudet, A., & Zipfel, B. (2023). An overlooked Australopithecus brain endocast from Makapansgat, South Africa. Journal of Human Evolution, 178, 103346. https://doi.org/10.1016/j.jhevol.2023.103346

Dart, R. A. (1949). The cranio‐facial fragment of Australopithecus prometheus. American Journal of Physical Anthropology, 7(2), 187–214. https://doi.org/10.1002/ajpa.1330070204

Dumoncel, J., Subsol, G., Durrleman, S., Bertrand, A., De Jager, E., Oettlé, A. C., Lockhat, Z., Suleman, F. E., & Beaudet, A. (2021). Are endocasts reliable proxies for brains? A 3D quantitative comparison of the extant human brain and endocast. Journal of Anatomy, 238(2), 480–488. https://doi.org/10.1111/joa.13318

Falk, D., Zollikofer, C. P. E., Ponce de León, M., Semendeferi, K., Alatorre Warren, J. L., & Hopkins, W. D. (2018). Identification of in vivo sulci on the external surface of eight adult chimpanzee brains: Implications for interpreting early hominin endocasts. Brain, Behavior and Evolution, 91(1), 45–58. https://doi.org/10.1159/000487248

Labra, N., Mounier, A., Leprince, Y., Rivière, D., Didier, M., Bardinet, E., Santin, M. D., Mangin, J. F., Filippo, A., Albessard‐Ball, L., Beaudet, A., Broadfield, D., Bruner, E., Carlson, K. J., Cofran, Z., Falk, D., Gilissen, E., Gómez‐Robles, A., Neubauer, S., … Balzeau, A. (2024). What do brain endocasts tell us? A comparative analysis of the accuracy of sulcal identification by experts and perspectives in palaeoanthropology. Journal of Anatomy, 244(2), 274–296. https://doi.org/10.1111/joa.13966

Rudebeck, P. H., & Rich, E. L. (2018). Orbitofrontal cortex. Current Biology, 28(18), R1083–R1088. https://doi.org/10.1016/j.cub.2018.07.018

Shilton, D., Breski, M., Dor, D., & Jablonka, E. (2020). Human social evolution: Self-domestication or self-control? Frontiers in Psychology, 11. https://doi.org/10.3389/fpsyg.2020.00134

Homo naledi in a lawn chair

It is a great relief that Homo naledi, a most curious critter, was announced to the world on Thursday. I’ve been working on these fossils since May 2014, and it was really hard to keep my trap shut about it for over a year.

Homo naledi on my mind, and phone, all year.

Homo naledi on my mind, and the lock screen on my phone, all year. CT rendering of cranium DH3, top is to the left and front is to the top.

I was in London for the ESHE conference last week when **it hit the fan, and so I got to attend a small press conference from the paper’s publisher, eLife, for the announcement.

eLife press conference last Thursday. From left to right: Will Harcourt-Smith, Matthew Skinner, Noel Cameron, Alia Gurtov and Tracy Kivell.

eLife press conference last Thursday. From left to right: friends and colleagues Will Harcourt-Smith, Matthew Skinner, Noel Cameron, Alia Gurtov and Tracy Kivell.

I had just flown in from Kazakhstan, and was presenting some recent work on the evolution of brain growth (I’ll write a post about it soon, promise), so it was a bit hard to appreciate the gravity of the announcement. Although the awesome spread in National Geographic did help it sink in a bit.

Really blurry photo of Markus Bastir holding up the heaviest copy of National Geographic ever.

I’m wending my way back to Kazakhstan now, but in the coming weeks I will try to post more about these fossils, the project, and specifically what I’m working on.

Until then, I’d like to point out how much information is freely and easily available to the entire world about these fossils. The paper, full-length and filled with excellent images of many of the specimens and reconstructions, is available for free online here. In addition, you can download 3D surface scans of over 80 of the original fossils on MorphoSource, also totally free. Everything about this scientific discovery and its dissemination is unprecedented – the sheer number of fossils and the ease of access with which literally everyone (well, with an internet connection) can access this information has never occurred before. This is the way paleoanthropology should be. Hats off to Lee Berger and the other senior scientists on the project for making such a monumental resource available to all.

ResearchBlogging.orgBerger LR, Hawks J, de Ruiter DJ, Churchill SE, Schmid P, Delezene LK, Kivell TL, Garvin HM, Williams SA, DeSilva JM, Skinner MM, Musiba CM, Cameron N, Holliday TW, Harcourt-Smith W, Ackermann RR, Bastir M, Bogin B, Bolter D, Brophy J, Cofran ZD, Congdon KA, Deane AS, Dembo M, Drapeau M, Elliott MC, Feuerriegel EM, Garcia-Martinez D, Green DJ, Gurtov A, Irish JD, Kruger A, Laird MF, Marchi D, Meyer MR, Nalla S, Negash EW, Orr CM, Radovcic D, Schroeder L, Scott JE, Throckmorton Z, Tocheri MW, VanSickle C, Walker CS, Wei P, & Zipfel B (2015). Homo naledi, a new species of the genus Homo from the Dinaledi Chamber, South Africa. eLife, 4 PMID: 26354291

One more great bioanthro resource

Following up on yesterday’s post containing links to various online data and resources, Dr. Rebecca Jabbour brought the Human Origins Database to my attention today. As stated on the database’s home page:

Currently the Human Origins Database contains the measurements and skeletal element information present in the Koobi Fora Research Project. Volume 4: Hominid Cranial Remains by Bernard Wood (1991). In addition, a complete inventory of skeletal elements present for the chimpanzee and gorilla collections at the Powell-Cotton Museum is included, along with annotated data sheets providing information on epiphyseal fusion, element condition, etc.

Here’s a taste of the Powell-Cotton chimpanzee catalog & maturation info:

You have to register to access the database – which you should do since it’s free and appears immensely useful. Enjoy!

Online skeletal and dental datasets (links links links!)

The TM 1517a fossil, from here

Jean Jacques Hublin has a commentary [1] in the current issue of Nature, about making fossils available for scanning, digital replication, and ultimately hopefully open dissemination. As Hublin points out, it’s a bit ridiculous that a fossil is a rare enough thing as it is, but even after their discovery, fossils “can become unreachable relics once they are in storage.” Fortunately, Hublin goes on to point to online collections that are available to anyone interested. Somewhat ironically, the article about free-ish data is behind a paywall, so here are the resources Hublin describes:

  • The Ditsong CT Archive, created by the collaboration of Hublin’s group at Max Planck and the Ditsong (formerly Transvaal) Museum in South Africa, which contains digitized hominin fossils from the site of Kromdraai (see also [ref 2]). Check out the type specimen of Paranthropus robustus, from this site, above!
  • You can download CT scans of the Skhul V early human fossil, thanks to the Harvard Peabody Museum.
  • Wanna see the the oldest possible animal embryos, early humans, insects, and other crazy fossils? Check out the European Synchrotron Radiation Facility’s microCT database.
  • Get free CT scans of 2 human skulls, thanks to the Virtual Anthropology program at the University of Vienna.
  • Finally, the NESPOS initiative is a large repository of Pleistocene hominin fossil scans, which I somehow don’t know enough about.

In addition to these sources, here are 2 other datasets that are pretty badass:

ResearchBlogging.orgI haven’t had much opportunity to look into these datasets Hublin pointed out, but they look promising. If you know of other good resources, please do share!

References
[1] Hublin, J. (2013). Palaeontology: Free digital scans of human fossils Nature, 497 (7448), 183-183 DOI: 10.1038/497183a

[2] Skinner MM, Kivell TL, Potze S, & Hublin JJ (2013). Microtomographic archive of fossil hominin specimens from Kromdraai B, South Africa. Journal of human evolution, 64 (5), 434-47 PMID: 23541384

Open wide for open access: chimpanzee tooth eruption

Two anthropology papers came out yesterday in advance print at the Proceedings of the National Academy of Sciences. I’d like first to draw your attention to the fact that they’re open access – normally such scientific papers are behind a paywall, but these two can be obtained by anyone (well, anyone with internet). One is about the chronology and nature of Acheulean technology at the 1.7-1.0 mya site of Konso in Ethiopia. The other, and the subject of this post, is about life history in wild chimpanzees from Uganda.

Tanya Smith and colleagues analyzed behavior of chimps and photographs of chimps’ erupting first molars (“M1”) to determine a] the age at which these events happen in the wild (in this population at least), and b] whether M1 eruption is tightly linked with other important life history variables, such as the adoption of adult foods, as had previously been claimed. What an adorable study – check out figure 1 from the paper (right):

Figuring out age at M1 eruption in wild, healthy chimps is important because there has been debate about whether wild chimps actually erupt their teeth at as young of ages as they do in captivity – not natural conditions. This question has recently been investigated in a skeletal sample of wild chimps of known age, from Tai forest in Cote d’Ivoire (Zihlman et al. 2004, T Smith et al. 2010), but somehow these studies raised more questions than they answered (e.g. BH Smith and Boesch 2011). So TM Smith and colleagues decided to further address this question with photographic evidence of living, arguably healthy chimps.

They found that M1 eruption occurred anywhere from 2.8-3.3 years of age in their sample of 5 cuddly infants, consistent with estimates from captivity. I have to say I’m a bit surprised it wasn’t later (but what fun is science if it’s not surprising?). Of course, this is based on 5 infants from one population, so it could stand to be reinvestigated in other chimp populations as the authors note.

Smith et al’s second task was to see how well age at M1 eruption coincided with other life history variables – this is supposed to be an important event, alleged to coincide with cessation of weaning and the adoption of adult foods. Moreover, since a mother is no longer nursing her infant, M1 eruption “should” also be roughly contemporaneous with a mother’s return to estrus cycling and subsequent reproduction. Many infants were observed to begin eating adult-like foods prior to M1 eruption, around 3 years. Unexpectedly however, infants also nursed for a while even after M1 eruption. In fact, time spent nursing actually increased for a brief period around 3 years of age, possibly because their mothers’ milk was not as nutritious as at younger ages.

Now, what interests me most about this are possible implications for the evolution of growth and life history. Many researchers have argued that extinct hominids, like the australopithecines, would have grown up relatively rapidly like apes, rather than slowly like humans. This claim has been based pretty much entirely on dental development, until my dissertation research. There, I’ve shown that one hominid, Australopithecus robustus, probably experienced greater jaw growth than humans prior to eruption of the M2. Now, if this hominid erupted its teeth as fast as apes, and grew more than humans, this implies really really high growth rates for A. robustus (that is, if we can extrapolate from the jaw to the overall body size).

ResearchBlogging.orgI’ll be working a bit more on this latter point in the near future. In the mean time, let’s hear it for open access bioanthro Continue reading

And so the plot thickens



These results suggest admixture between Denisovans or a Denisova-related population and the ancestors of East Asians, and that the history of anatomically modern and archaic humans might be more complex than previously proposed.


I’m sure it will turn out to be more complex still. Onward and upward!


Freely available online through the PNAS open access option.”
http://www.pnas.org/content/early/2011/10/24/1108181108.abstract


Sweet!


Here you go
Skoglund P and Jakobsson M. Archaic human ancestry in East Asia. Proceedings of the National Academy of Sciences in press. doi:10.1073/pnas.1108181108.